Scientific publications

List of papers published

Garcia-Lopez, M., T. Lurier, M. Bouilloud, J. Pradel, C. Tatard, D. Sepulveda, G. Anfray, J. Dussert, P. Bourhy, N. Charbonnel, and Z. Djelouadji. 2024. Prevalence, genetic diversity and eco-epidemiology of pathogenic Leptospira species in small mammal communities in urban parks Lyon city, France. Plos One 19: e0300523. Doi:10.1371/journal.pone.0300523.

Bouilloud, M., M. Galan, J. Pradel, A. Loiseau, J. Ferrero, R. Gallet, B. Roche, and N. Charbonnel. 2024. Exploring the potential effects of forests urbanization on the interplay between small mammal communities and their gut microbiota. Animal microbiome 6:1. Doi:10.1186/s42523-024-00301-y.

Alburkat, H., T. Smura, M. Bouilloud, J. Pradel, G. Anfray, K. Berthier, L. Dutra, A. Loiseau, T. Niamsap, V. Olander, D. Sepulveda, V. Venkat, N. Charbonnel, G. Castel, and T. Sironen. 2024. Evolution and genetic characterization of Seoul virus in wild rats Rattus Norvegicus from an urban park in Lyon, France 2020-2022. PLoS Neglected Tropical Diseases 13:e0012142. Doi:10.1371/journal.pntd.0012142.

Zintl, A. et al. (2023) Presence and identity of Babesia microti in Ireland. Tick and tick-borne diseases. 14,6,102221. Doi:10.1016/j.ttbdis.2023.102221

Castel, G. et al. (2023) Puumala orthohantavirus circulation in its wild reservoir, the bank vole, during the 2021 outbreak of hemorrhagic fever with renal syndrome in Jura, France. Infections now. 53,8,104767. Doi:10.1016/j.idnow.2023.104767

Bouilloud, M. et al. (2023) Three-way relationships between gut microbiota, helminth assemblages and bacterial infections in wild rodent populations. PCI Journal. Doi:10.1101/2022.05.23.493084v2

Pradel, J. et al. (2022) Small terrestrial mammals (Rodentia, Soricomorpha) along a gradient of forest anthropisation (reserves, managed forests, urban parks) in France. Bidiversity Data Journal 10, e95214. Doi:10.3897/BDJ.10.e95214

*Bourret, V. et al. (2022) Serological surveillance for wild rodent infection with SARS-CoV-2 in Europe. Emerging Infectious Diseases 12, 2577-2580. Doi:10.3201/eid2812.221235

*Colombo, V.C. et al. (2022) SARS-CoV-2 surveillance in Norway rats (Rattus norvegicus) from Antwerp sewer system, Belgium. Transboundary and Emerging Diseases 69, 3016–3021. Doi:10.1111/tbed.14219

*Rabalski, L. et al. (2022) Zoonotic spill-over of SARS-CoV-2: mink-adapted virus in humans. Clinical Microbiology and Infection 28. 10.1016/j.cmi.2021.12.001

Grzybek, M. et al. (2021) Seroprevalence of Toxoplasma gondii among sylvatic rodents in Poland. Animals 11. Doi:10.3390/ani11041048

*Rabalski, L. et al. (2021) Severe acute respiratory syndrome coronavirus 2 in farmed mink (Neovison vison), Poland. Emerging Infectious Diseases 27, 2333-2339. Doi :10.3201/eid2709.210286

McManus, A. et al. (2021) The invasive bank vole (Myodes glareolus): A model system for studying parasites and ecoimmunology during a biological invasion. Animals 11. Doi:10.3390/ani11092529

Grzybek, M. et al. (2020) Zoonotic viruses in three species of voles from Poland. Animals 10. Doi:10.3390/ani10101820

List of papers submitted

Sluydts, V., M. Bouilloud, M. Galan, H. Alburkat, A. Bordes, V. Bourret, V. C. Colombo, L. Debruyn, L. Dutra, J. A. Eccard, J. Firozpoor, R. Gallet, M. Grzybek, H. Henttonen, J. Jacob, A. McManus, T. Sironen, P. Stuart, B. Roche, H. Leirs, and N. Charbonnel. Submitted. Drivers of host-pathogen community assemblies in European forests and urban green spaces. Ecography. Doi:10.1101/2024.09.19.613856

Arpin, I. et al. (Submitted) The influence of problem wickedness on inter- and transdisciplinary research. The example of an ongoing Ecohealth project. Environmental Science and Policy.

* Papers also related to the BioRodDis-Covid19 project